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  5. Brara.E01925.1

Brara.E01925.1


Description : Unknown function


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01925.1
Cluster HCAA Clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Brara.I02739.1 No alias siRNA-binding factor *(AGO2) of non-canonical RdDM pathway 0.04 Orthogroups_2024-Update
LOC_Os03g57560 No alias piwi domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.7G201100.1 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
BP GO:0006282 regulation of DNA repair IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:0080135 regulation of cellular response to stress IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
BP GO:2001020 regulation of response to DNA damage stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR032473 Argonaute_Mid_dom 646 721
IPR003165 Piwi 765 884
IPR032472 ArgoL2 589 635
IPR024357 Argonaut_Gly-rich 142 232
IPR032474 Argonaute_N 250 385
IPR014811 ArgoL1 397 447
IPR003100 PAZ_dom 474 578
No external refs found!