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  5. Brara.E01926.1

Brara.E01926.1


Description : transcriptional co-activator *(FBH) & bHLH-type transcription factor


Gene families : OG_42_0000702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01926.1
Cluster HCAA Clusters: Cluster_389

Target Alias Description ECC score Gene Family Method Actions
Brara.D02614.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E00274.1 No alias transcriptional co-activator *(FBH) & bHLH-type... 0.03 Orthogroups_2024-Update
Glyma.03G141700 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G248100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s213_60V6 No alias F23H24.3; basic helix-loop-helix (bHLH) family protein... 0.02 Orthogroups_2024-Update
Seita.2G349800.1 No alias transcriptional co-activator *(FBH) & bHLH-type... 0.02 Orthogroups_2024-Update
Sopen01g033890 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g023550 No alias Helix-loop-helix DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 176 222
No external refs found!