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  5. Brara.E01969.1

Brara.E01969.1


Description : Unknown function


Gene families : OG_42_0000196 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01969.1
Cluster HCAA Clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
At2g41560 No alias Calcium-transporting ATPase 4, plasma membrane-type... 0.03 Orthogroups_2024-Update
Glyma.19G038600 No alias ATPase E1-E2 type family protein / haloacid... 0.04 Orthogroups_2024-Update
MA_10034665g0010 No alias "(at5g57110 : 291.0) Arabidopsis-autoinhibited Ca2+... 0.04 Orthogroups_2024-Update
Seita.5G200700.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
Seita.6G201400.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004014 ATPase_P-typ_cation-transptr_N 101 169
IPR006068 ATPase_P-typ_cation-transptr_C 434 580
No external refs found!