Brara.E02044.1

Description : organelle RNA splicing factor *(APO)

Gene families : OG_42_0001137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E02044.1
Cluster	HCAA Clusters: Cluster_228

Target	Alias	Description	ECC score	Gene Family Method	Actions
MA_45379g0010	No alias	(at3g21740 : 316.0) ACCUMULATION OF PHOTOSYSTEM ONE 4;...	0.03	Orthogroups_2024-Update
Sopen08g028600	No alias	APO RNA-binding	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR023342	APO_dom	199	309
IPR023342	APO_dom	27	168

External Links

No external refs found!