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  5. Brara.E02083.1

Brara.E02083.1


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E02083.1
Cluster HCAA Clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
A4A49_12312 No alias dof zinc finger protein dof2.1 0.03 Orthogroups_2024-Update
A4A49_15151 No alias dof zinc finger protein dof2.4 0.05 Orthogroups_2024-Update
At1g64620 No alias Dof zinc finger protein DOF1.8... 0.03 Orthogroups_2024-Update
At4g38000 No alias DOF4.7 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K8] 0.03 Orthogroups_2024-Update
At5g02460 No alias Dof zinc finger protein DOF5.1... 0.03 Orthogroups_2024-Update
At5g66940 No alias Dof zinc finger protein DOF5.8... 0.03 Orthogroups_2024-Update
Bradi3g51510 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Bradi4g04260 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Brara.I00873.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Glyma.13G230200 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.13G237500 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.13G329000 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
Glyma.15G076000 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G113190.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU7Hr1G043250.2 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
MA_18267g0010 No alias (at5g62940 : 141.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
Potri.004G046600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Pp1s124_139V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Pp1s18_64V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.1G290700.1 No alias transcription factor *(DOF) 0.06 Orthogroups_2024-Update
Sobic.007G223200.2 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc03g112930 No alias Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC) 0.03 Orthogroups_2024-Update
Solyc04g070960 No alias Dof zinc finger protein (AHRD V3.3 *-* W9S6D3_9ROSA) 0.03 Orthogroups_2024-Update
Sopen06g027770 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen06g031790 No alias Dof domain, zinc finger 0.06 Orthogroups_2024-Update
Sopen06g032440 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 29 85
No external refs found!