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  5. Brara.E02088.1

Brara.E02088.1


Description : subfamily ABCC transporter


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E02088.1
Cluster HCAA Clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
A4A49_11075 No alias abc transporter c family member 3 0.03 Orthogroups_2024-Update
At2g47800 No alias ABC transporter C family member 4... 0.03 Orthogroups_2024-Update
Bradi2g04577 No alias multidrug resistance-associated protein 3 0.02 Orthogroups_2024-Update
Bradi5g03460 No alias multidrug resistance-associated protein 10 0.03 Orthogroups_2024-Update
GRMZM2G113203 No alias multidrug resistance-associated protein 6 0.03 Orthogroups_2024-Update
GRMZM2G365957 No alias multidrug resistance-associated protein 4 0.03 Orthogroups_2024-Update
Glyma.15G148500 No alias multidrug resistance-associated protein 4 0.03 Orthogroups_2024-Update
LOC_Os12g37580 No alias ABC transporter, ATP-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00021415-RA No alias (at2g47800 : 184.0) Encodes a plasma membrane localized... 0.01 Orthogroups_2024-Update
Potri.001G362300 No alias multidrug resistance-associated protein 3 0.04 Orthogroups_2024-Update
Potri.014G180100 No alias multidrug resistance-associated protein 9 0.03 Orthogroups_2024-Update
Seita.7G076700.1 No alias subfamily ABCC transporter 0.01 Orthogroups_2024-Update
Seita.9G543800.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Sobic.001G508200.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Sobic.003G049500.2 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Solyc12g044820 No alias ABC transporter-like family-protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen03g003490 No alias ABC transporter 0.01 Orthogroups_2024-Update
evm.model.contig_3396.7 No alias (at2g34660 : 863.0) encodes a multidrug... 0.02 Orthogroups_2024-Update
evm.model.tig00000718.1 No alias (at2g34660 : 358.0) encodes a multidrug... 0.02 Orthogroups_2024-Update
evm.model.tig00001254.7 No alias (at2g47800 : 162.0) Encodes a plasma membrane localized... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1064 1212
IPR003439 ABC_transporter-like 447 581
IPR011527 ABC1_TM_dom 115 382
IPR011527 ABC1_TM_dom 733 996
No external refs found!