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Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.E02154.1 | |
| Cluster | HCAA Clusters: Cluster_124 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 180944 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 52147 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
| At5g59200 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | Orthogroups_2024-Update | |
| Bradi2g25480 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.04G129100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.10G190600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G069901 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G213300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.12G183600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G110410.2 | No alias | RNA editing factor *(OTP72) | 0.03 | Orthogroups_2024-Update | |
| LOC_Os11g44930 | No alias | pentatricopeptide repeat domain containing protein,... | 0.04 | Orthogroups_2024-Update | |
| PSME_00001689-RA | No alias | (at1g11290 : 570.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00003874-RA | No alias | (at4g33170 : 590.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00005384-RA | No alias | (at3g12770 : 639.0) Encodes a pentatricopeptide repeat... | 0.04 | Orthogroups_2024-Update | |
| PSME_00007759-RA | No alias | (at3g12770 : 656.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
| PSME_00011140-RA | No alias | (at1g11290 : 575.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00013106-RA | No alias | (at4g13650 : 681.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00014659-RA | No alias | (at1g11290 : 712.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00021884-RA | No alias | (at2g27610 : 613.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00057058-RA | No alias | (at3g12770 : 592.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
| PSME_00057163-RA | No alias | (at1g11290 : 707.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| Seita.1G077500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.1G237400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.2G091900.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Seita.2G177900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.2G203900.1 | No alias | RNA editing factor *(OTP87) | 0.03 | Orthogroups_2024-Update | |
| Seita.4G225800.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.5G124400.1 | No alias | RNA editing factor *(OTP81) | 0.06 | Orthogroups_2024-Update | |
| Seita.5G326600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.5G361000.1 | No alias | RNA editing factor *(MEF10) | 0.03 | Orthogroups_2024-Update | |
| Seita.9G355700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.9G477500.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.002G384800.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.003G380100.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Solyc09g092150 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Sopen09g004550 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
| MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
| BP | GO:0006413 | translational initiation | IEP | Predicted GO |
| MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Predicted GO |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Predicted GO |
| MF | GO:0019211 | phosphatase activator activity | IEP | Predicted GO |
| CC | GO:0030684 | preribosome | IEP | Predicted GO |
| CC | GO:0031090 | organelle membrane | IEP | Predicted GO |
| CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
| MF | GO:0051287 | NAD binding | IEP | Predicted GO |
| BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Predicted GO |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Predicted GO |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
| No external refs found! |