Brara.E02326.1

Description : E3 ubiquitin ligase

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E02326.1
Cluster	HCAA Clusters: Cluster_377

Target	Alias	Description	ECC score	Gene Family Method
Brara.E00873.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Glyma.09G172100	No alias	CYS, MET, PRO, and GLY protein 1	0.03	Orthogroups_2024-Update
Glyma.14G212200	No alias	CYS, MET, PRO, and GLY protein 1	0.04	Orthogroups_2024-Update
MA_410546g0010	No alias	(at2g35930 : 239.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
MA_415344g0010	No alias	(at2g35930 : 169.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
Potri.008G137700	No alias	ARM repeat superfamily protein	0.03	Orthogroups_2024-Update
Solyc01g009330	No alias	U-box domain-containing family protein (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	16Dec
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	16Dec
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Predicted GO
BP	GO:0006801	superoxide metabolic process	IEP	Predicted GO
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predicted GO
BP	GO:0046486	glycerolipid metabolic process	IEP	Predicted GO
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Predicted GO
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	12	79

External Links

No external refs found!