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At2g17210


Description : Pentatricopeptide repeat-containing protein At2g17210 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII7]


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g17210
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
415185 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 Orthogroups_2024-Update
97289 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 Orthogroups_2024-Update
Brara.B03138.1 No alias RNA editing factor *(OTP85) 0.03 Orthogroups_2024-Update
Brara.H03086.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G085770.2 No alias RNA editing factor *(CRR2) 0.02 Orthogroups_2024-Update
MA_62815g0010 No alias (at1g25360 : 760.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
PSME_00005244-RA No alias (at3g46790 : 286.0) Encodes a member of a PCMP (plant... 0.03 Orthogroups_2024-Update
PSME_00005384-RA No alias (at3g12770 : 639.0) Encodes a pentatricopeptide repeat... 0.03 Orthogroups_2024-Update
Seita.1G102000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G203300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G295700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G097700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G197400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g041720 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 212 238
IPR002885 Pentatricopeptide_repeat 416 442
IPR002885 Pentatricopeptide_repeat 285 308
IPR002885 Pentatricopeptide_repeat 386 413
IPR002885 Pentatricopeptide_repeat 313 359
IPR002885 Pentatricopeptide_repeat 512 559
No external refs found!