Brara.E02480.1

Description : subgroup ARR-B transcription factor & B-type ARR response activator of cytokinin signalling

Gene families : OG_42_0000401 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E02480.1
Cluster	HCAA Clusters: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
Glyma.10G269601	No alias	response regulator 12	0.03	Orthogroups_2024-Update
Glyma.15G145200	No alias	response regulator 2	0.03	Orthogroups_2024-Update
Glyma.17G217100	No alias	response regulator 12	0.03	Orthogroups_2024-Update
LOC_Os03g12350	No alias	two-component response regulator, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00013455-RA	No alias	(at4g16110 : 260.0) Encodes a pollen-specific...	0.02	Orthogroups_2024-Update
Pp1s42_161V6	No alias	type-b response regulator	0.03	Orthogroups_2024-Update
Seita.1G061200.1	No alias	subgroup ARR-B transcription factor & B-type ARR...	0.03	Orthogroups_2024-Update
Sobic.001G451000.1	No alias	subgroup ARR-B transcription factor & B-type ARR...	0.02	Orthogroups_2024-Update
Sobic.003G393300.1	No alias	subgroup ARR-B transcription factor & B-type ARR...	0.05	Orthogroups_2024-Update
Solyc05g054390	No alias	Two-component response regulator (AHRD V3.3 *** W9RS74_9ROSA)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	16Dec
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Predicted GO
MF	GO:0004860	protein kinase inhibitor activity	IEP	Predicted GO
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Predicted GO
MF	GO:0005048	signal sequence binding	IEP	Predicted GO
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Predicted GO
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Predicted GO
BP	GO:0006476	protein deacetylation	IEP	Predicted GO
BP	GO:0006621	protein retention in ER lumen	IEP	Predicted GO
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Predicted GO
BP	GO:0007265	Ras protein signal transduction	IEP	Predicted GO
BP	GO:0007266	Rho protein signal transduction	IEP	Predicted GO
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Predicted GO
CC	GO:0008290	F-actin capping protein complex	IEP	Predicted GO
BP	GO:0010639	negative regulation of organelle organization	IEP	Predicted GO
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015693	magnesium ion transport	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Predicted GO
BP	GO:0016575	histone deacetylation	IEP	Predicted GO
MF	GO:0019210	kinase inhibitor activity	IEP	Predicted GO
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Predicted GO
BP	GO:0030832	regulation of actin filament length	IEP	Predicted GO
BP	GO:0030833	regulation of actin filament polymerization	IEP	Predicted GO
BP	GO:0030834	regulation of actin filament depolymerization	IEP	Predicted GO
BP	GO:0030835	negative regulation of actin filament depolymerization	IEP	Predicted GO
BP	GO:0030837	negative regulation of actin filament polymerization	IEP	Predicted GO
BP	GO:0031333	negative regulation of protein complex assembly	IEP	Predicted GO
BP	GO:0032271	regulation of protein polymerization	IEP	Predicted GO
BP	GO:0032272	negative regulation of protein polymerization	IEP	Predicted GO
BP	GO:0032507	maintenance of protein location in cell	IEP	Predicted GO
BP	GO:0032535	regulation of cellular component size	IEP	Predicted GO
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Predicted GO
BP	GO:0032970	regulation of actin filament-based process	IEP	Predicted GO
BP	GO:0033043	regulation of organelle organization	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Predicted GO
BP	GO:0035601	protein deacylation	IEP	Predicted GO
MF	GO:0042277	peptide binding	IEP	Predicted GO
BP	GO:0043085	positive regulation of catalytic activity	IEP	Predicted GO
BP	GO:0043242	negative regulation of protein complex disassembly	IEP	Predicted GO
BP	GO:0043244	regulation of protein complex disassembly	IEP	Predicted GO
BP	GO:0043254	regulation of protein complex assembly	IEP	Predicted GO
BP	GO:0043484	regulation of RNA splicing	IEP	Predicted GO
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Predicted GO
BP	GO:0044093	positive regulation of molecular function	IEP	Predicted GO
BP	GO:0045185	maintenance of protein location	IEP	Predicted GO
MF	GO:0046923	ER retention sequence binding	IEP	Predicted GO
BP	GO:0048024	regulation of mRNA splicing, via spliceosome	IEP	Predicted GO
BP	GO:0050684	regulation of mRNA processing	IEP	Predicted GO
BP	GO:0051016	barbed-end actin filament capping	IEP	Predicted GO
BP	GO:0051129	negative regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Predicted GO
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	Predicted GO
BP	GO:0051651	maintenance of location in cell	IEP	Predicted GO
BP	GO:0051693	actin filament capping	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
BP	GO:0070838	divalent metal ion transport	IEP	Predicted GO
BP	GO:0072511	divalent inorganic cation transport	IEP	Predicted GO
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Predicted GO
BP	GO:0090066	regulation of anatomical structure size	IEP	Predicted GO
BP	GO:0098732	macromolecule deacylation	IEP	Predicted GO
BP	GO:0110053	regulation of actin filament organization	IEP	Predicted GO
BP	GO:1901879	regulation of protein depolymerization	IEP	Predicted GO
BP	GO:1901880	negative regulation of protein depolymerization	IEP	Predicted GO
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Predicted GO
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	Predicted GO
BP	GO:1903311	regulation of mRNA metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	230	280
IPR001789	Sig_transdc_resp-reg_receiver	37	145

External Links

No external refs found!

Brara.E02480.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation