Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.E02489.1 | |
Cluster | HCAA Clusters: Cluster_343 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
59303 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
At1g49200 | No alias | RING-H2 finger protein ATL75... | 0.03 | Orthogroups_2024-Update | |
Bradi1g45727 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi2g22650 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Brara.B02021.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Brara.F02863.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Brara.H00897.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Glyma.19G010400 | No alias | hypoxia-responsive family protein / zinc finger... | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G050490.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
LOC_Os09g29310 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
MA_12352g0010 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
Mp7g06030.1 | No alias | RING-H2-class E3 ligase | 0.02 | Orthogroups_2024-Update | |
Potri.008G018900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.2G390800.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.004G109100.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.004G283400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Solyc02g067700 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_2102.17 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00001128.32 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000295 | adenine nucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0005346 | purine ribonucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005347 | ATP transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005471 | ATP:ADP antiporter activity | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
BP | GO:0006862 | nucleotide transport | IEP | Predicted GO |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
BP | GO:0007275 | multicellular organism development | IEP | Predicted GO |
MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
MF | GO:0008509 | anion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015215 | nucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015216 | purine nucleotide transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015217 | ADP transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015238 | drug transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
MF | GO:0015301 | anion:anion antiporter activity | IEP | Predicted GO |
MF | GO:0015605 | organophosphate ester transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015689 | molybdate ion transport | IEP | Predicted GO |
BP | GO:0015698 | inorganic anion transport | IEP | Predicted GO |
BP | GO:0015748 | organophosphate ester transport | IEP | Predicted GO |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0017025 | TBP-class protein binding | IEP | Predicted GO |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
MF | GO:0022836 | gated channel activity | IEP | Predicted GO |
MF | GO:0022839 | ion gated channel activity | IEP | Predicted GO |
BP | GO:0032501 | multicellular organismal process | IEP | Predicted GO |
BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
MF | GO:0099516 | ion antiporter activity | IEP | Predicted GO |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 114 | 157 |
No external refs found! |