Brara.E02519.1

Description : subfamily ABCG transporter

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E02519.1
Cluster	HCAA Clusters: Cluster_134

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G143139	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Glyma.10G203000	No alias	pleiotropic drug resistance 11	0.05	Orthogroups_2024-Update
LOC_Os11g37700	No alias	pleiotropic drug resistance protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_3894g0010	No alias	(q76cu2\|pdr1_tobac : 501.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
PSME_00010410-RA	No alias	(q8gu88\|pdr7_orysa : 1693.0) Putative pleiotropic drug...	0.05	Orthogroups_2024-Update
evm.model.tig00000057.108	No alias	(at3g16340 : 255.0) pleiotropic drug resistance 1...	0.02	Orthogroups_2024-Update
evm.model.tig00020902.2	No alias	(at3g16340 : 221.0) pleiotropic drug resistance 1...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	Predicted GO
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predicted GO
CC	GO:0005811	lipid droplet	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Predicted GO
MF	GO:0016791	phosphatase activity	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	428	638
IPR029481	ABC_trans_N	72	135
IPR003439	ABC_transporter-like	161	342

External Links

No external refs found!