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  5. Brara.E02584.1

Brara.E02584.1


Description : Unknown function


Gene families : OG_42_0000476 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000476_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E02584.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
A4A49_01910 No alias putative 2-oxoglutarate-dependent dioxygenase aop1.2 0.03 Orthogroups_2024-Update
At4g03050 No alias 2-oxoglutarate-dependent dioxygenase AOP3... 0.03 Orthogroups_2024-Update
Bradi2g15660 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Orthogroups_2024-Update
Brara.F00169.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.07G033700 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
Glyma.16G072000 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
LOC_Os08g32170 No alias oxidoreductase, 2OG-FeII oxygenase domain containing... 0.03 Orthogroups_2024-Update
PSME_00030217-RA No alias (at1g52800 : 109.0) 2-oxoglutarate (2OG) and... 0.02 Orthogroups_2024-Update
Potri.018G033400 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
Seita.3G136600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g006610 No alias 2-oxoglutarate-dependent dioxygenase-related family... 0.04 Orthogroups_2024-Update
Solyc04g053050 No alias 2-oxoglutarate-dependent dioxygenase-related family... 0.03 Orthogroups_2024-Update
Solyc06g067870 No alias 2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** H9AY17_SALMI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!