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Description : Pectate lyase (AHRD V3.3 *** K4BGT7_SOLLC)
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc03g058890 | |
| Cluster | HCCA clusters: Cluster_69 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 81909 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| A4A49_12542 | No alias | pectate lyase | 0.03 | Orthogroups_2024-Update | |
| At3g24230 | No alias | Probable pectate lyase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRM5] | 0.04 | Orthogroups_2024-Update | |
| At3g54920 | No alias | Probable pectate lyase 13... | 0.03 | Orthogroups_2024-Update | |
| At4g13710 | No alias | Probable pectate lyase 15... | 0.03 | Orthogroups_2024-Update | |
| Brara.B00588.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Brara.H00489.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.02 | Orthogroups_2024-Update | |
| Brara.H03034.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Brara.I04991.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Brara.K00935.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Glyma.04G191100 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G174700 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G244900 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.20G112600 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G075970.2 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.04 | Orthogroups_2024-Update | |
| MA_10430145g0020 | No alias | (at5g48900 : 488.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| PSME_00017512-RA | No alias | (at4g24780 : 545.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| PSME_00020308-RA | No alias | (at4g13710 : 598.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
| Potri.008G032700 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.008G148800 | No alias | Pectate lyase family protein | 0.04 | Orthogroups_2024-Update | |
| Potri.008G182200 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s1_550V6 | No alias | Pectate lyase precursor (ZePel) [Zinnia elegans] | 0.02 | Orthogroups_2024-Update | |
| Pp1s28_242V6 | No alias | pectate lyase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G091000.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G034200.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Solyc02g080910 | No alias | Pectate lyase (AHRD V3.3 *** K4B9W1_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Solyc03g111690 | No alias | Pectate lyase family protein (AHRD V3.3 *** AT1G67750.1) | 0.03 | Orthogroups_2024-Update | |
| Sopen02g025600 | No alias | Pectate lyase | 0.03 | Orthogroups_2024-Update | |
| Sopen05g008950 | No alias | Pectate lyase | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030570 | pectate lyase activity | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003951 | NAD+ kinase activity | IEP | Predicted GO |
| MF | GO:0004512 | inositol-3-phosphate synthase activity | IEP | Predicted GO |
| BP | GO:0006020 | inositol metabolic process | IEP | Predicted GO |
| BP | GO:0006021 | inositol biosynthetic process | IEP | Predicted GO |
| BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
| BP | GO:0006739 | NADP metabolic process | IEP | Predicted GO |
| BP | GO:0006741 | NADP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0008037 | cell recognition | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
| BP | GO:0019751 | polyol metabolic process | IEP | Predicted GO |
| BP | GO:0022414 | reproductive process | IEP | Predicted GO |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | Predicted GO |
| BP | GO:0046173 | polyol biosynthetic process | IEP | Predicted GO |
| BP | GO:0048544 | recognition of pollen | IEP | Predicted GO |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
| No external refs found! |