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  5. Brara.E02654.1

Brara.E02654.1


Description : UDP-L-rhamnose synthase *(RHM)


Gene families : OG_42_0000886 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000886_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E02654.1
Cluster HCAA Clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Bradi3g08850 No alias rhamnose biosynthesis 1 0.04 Orthogroups_2024-Update
Kfl00409_0080 kfl00409_0080_v1.1 (at1g53500 : 1034.0) encodes a putative NDP-L-rhamnose... 0.02 Orthogroups_2024-Update
Mp1g04880.1 No alias UDP-L-rhamnose synthase 0.03 Orthogroups_2024-Update
Seita.9G451000.1 No alias UDP-L-rhamnose synthase *(RHM) 0.02 Orthogroups_2024-Update
Solyc08g080140 No alias 3,5-epimerase/4-reductase (AHRD V3.3 *** I3SMF8_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP Predicted GO
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 382 552
IPR016040 NAD(P)-bd_dom 10 315
No external refs found!