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  5. Brara.E02737.1

Brara.E02737.1


Description : C2H2 subclass IDD transcription factor


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E02737.1
Cluster HCAA Clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
At1g55110 No alias Protein indeterminate-domain 7... 0.03 Orthogroups_2024-Update
At5g66730 No alias IDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UMT2] 0.04 Orthogroups_2024-Update
Bradi5g18530 No alias indeterminate(ID)-domain 4 0.03 Orthogroups_2024-Update
GRMZM2G123094 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.02G153900 No alias indeterminate(ID)-domain 2 0.03 Orthogroups_2024-Update
MA_26324g0010 No alias (at1g03840 : 352.0) MGP is a nuclear-localized putative... 0.03 Orthogroups_2024-Update
Potri.017G017100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Solyc11g069240 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.02 Orthogroups_2024-Update
Sopen03g040470 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update
Sopen04g003650 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update
Sopen04g033710 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!