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  5. Brara.E02927.1

Brara.E02927.1


Description : ROP-activating protein *(RopGAP)


Gene families : OG_42_0000700 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000700_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E02927.1
Cluster HCAA Clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
13258 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.03 Orthogroups_2024-Update
Brara.D02814.1 No alias ROP-activating protein *(RopGAP) 0.03 Orthogroups_2024-Update
Brara.E00110.1 No alias ROP-activating protein *(RopGAP) 0.04 Orthogroups_2024-Update
Glyma.19G258900 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.03 Orthogroups_2024-Update
HORVU2Hr1G010860.4 No alias ROP-activating protein *(RopGAP) 0.03 Orthogroups_2024-Update
LOC_Os12g05900 No alias rhoGAP domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.T106300 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.02 Orthogroups_2024-Update
Sopen11g027240 No alias RhoGAP domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003724 RNA helicase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000198 RhoGAP_dom 148 281
IPR000095 CRIB_dom 85 112
No external refs found!