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  5. Brara.E02934.1

Brara.E02934.1


Description : MYB class-R2R3 subgroup-18 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E02934.1
Cluster HCAA Clusters: Cluster_334

Target Alias Description ECC score Gene Family Method Actions
A4A49_12018 No alias transcription factor myb30 0.03 Orthogroups_2024-Update
A4A49_26356 No alias transcription factor myb21 0.02 Orthogroups_2024-Update
A4A49_28985 No alias transcription repressor myb4 0.03 Orthogroups_2024-Update
At3g02940 No alias At3g02940 [Source:UniProtKB/TrEMBL;Acc:Q9LDI5] 0.04 Orthogroups_2024-Update
At3g30210 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5] 0.03 Orthogroups_2024-Update
At3g48920 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SMT1] 0.04 Orthogroups_2024-Update
At4g01680 No alias Myb domain protein 55 [Source:UniProtKB/TrEMBL;Acc:Q9ZSI4] 0.04 Orthogroups_2024-Update
At4g21440 No alias Transcription factor MYB102... 0.03 Orthogroups_2024-Update
At5g12870 No alias Transcription factor MYB46... 0.03 Orthogroups_2024-Update
At5g14750 No alias WER1 [Source:UniProtKB/TrEMBL;Acc:A0A178UJM1] 0.03 Orthogroups_2024-Update
At5g56110 No alias MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75] 0.02 Orthogroups_2024-Update
Brara.B00568.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.G00616.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Brara.I01264.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01962.1 No alias MYB class-R2R3 subgroup-8 transcription factor &... 0.03 Orthogroups_2024-Update
GRMZM2G097636 No alias myb domain protein 63 0.04 Orthogroups_2024-Update
Glyma.03G225200 No alias myb domain protein 55 0.03 Orthogroups_2024-Update
Glyma.10G273000 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
Glyma.16G007200 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.18G261400 No alias myb domain protein 16 0.04 Orthogroups_2024-Update
Glyma.19G022100 No alias myb domain protein 30 0.03 Orthogroups_2024-Update
Glyma.19G038100 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.19G061600 No alias myb domain protein 24 0.03 Orthogroups_2024-Update
Glyma.19G257400 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
HORVU6Hr1G058580.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G060610.3 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
LOC_Os02g46780 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
MA_81763g0010 No alias (at4g38620 : 242.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00013409-RA No alias "(at2g47460 : 185.0) ""MYB12 belongs to subgroup 7 of... 0.02 Orthogroups_2024-Update
Potri.003G094200 No alias myb domain protein 9 0.04 Orthogroups_2024-Update
Potri.005G164900 No alias myb domain protein 93 0.02 Orthogroups_2024-Update
Potri.008G173400 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Potri.012G055600 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Potri.012G072500 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G084100 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
Seita.1G324800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
Seita.6G238400.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Seita.7G179600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Sobic.004G219800.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G177100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Solyc04g014470 No alias R2R3MYB transcription factor 20 0.03 Orthogroups_2024-Update
Solyc05g007710 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRS5_SALMI) 0.03 Orthogroups_2024-Update
Solyc09g008250 No alias blind-like1 0.04 Orthogroups_2024-Update
Solyc10g044680 No alias R2R3MYB transcription factor 55 0.04 Orthogroups_2024-Update
Solyc12g008670 No alias blind-like4 0.03 Orthogroups_2024-Update
Sopen02g032700 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen05g004950 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 35 82
IPR001005 SANT/Myb 88 131
No external refs found!