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  5. Brara.E02947.1

Brara.E02947.1


Description : WOX-type transcription factor


Gene families : OG_42_0000667 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000667_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E02947.1
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
At2g28610 No alias Homeobox-leucine zipper transcription factor... 0.04 Orthogroups_2024-Update
Brara.B00187.1 No alias WOX-type transcription factor 0.05 Orthogroups_2024-Update
Brara.J02640.1 No alias WOX-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.07G131000 No alias WUSCHEL related homeobox 1 0.06 Orthogroups_2024-Update
Glyma.07G219400 No alias WUSCHEL related homeobox 1 0.03 Orthogroups_2024-Update
Glyma.11G076500 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os01g62310 No alias homeobox domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00047765-RA No alias (at1g46480 : 131.0) Encodes a WUSCHEL-related homeobox... 0.03 Orthogroups_2024-Update
Potri.005G114700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Solyc11g072790 No alias WUSCHEL-like homeobox protein (AHRD V3.3 *-* F6MIV6_ORYSJ) 0.02 Orthogroups_2024-Update
Sopen03g026430 No alias Homeobox domain 0.03 Orthogroups_2024-Update
Sopen04g032250 No alias Homeobox domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 24 84
No external refs found!