Brara.E03015.1


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03015.1
Cluster HCAA Clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
A4A49_40512 No alias zinc finger protein zat10 0.03 Orthogroups_2024-Update
At1g27730 No alias Zinc finger protein ZAT10... 0.03 Orthogroups_2024-Update
At2g26940 No alias C2H2-type zinc finger family protein... 0.03 Orthogroups_2024-Update
Brara.B01066.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.C00112.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.F01949.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.F02478.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Brara.I03003.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G035103 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
GRMZM2G112251 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G113860 No alias zinc-finger protein 2 0.03 Orthogroups_2024-Update
GRMZM2G140033 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
GRMZM2G361210 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.06G201200 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Glyma.10G045200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G045300 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.12G081400 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.15G040700 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.18G287200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G193000 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G013460.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g60570 No alias ZOS3-22 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_85675g0010 No alias (at1g02040 : 116.0) C2H2-type zinc finger family... 0.04 Orthogroups_2024-Update
PSME_00056793-RA No alias (at1g02040 : 87.8) C2H2-type zinc finger family protein;... 0.03 Orthogroups_2024-Update
Potri.002G143600 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.009G166200 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Potri.010G229400 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Potri.014G017300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Seita.9G357400.1 No alias C2H2-type subclass ZAT transcription factor 0.05 Orthogroups_2024-Update
Seita.9G357500.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G035000.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G079500.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G330100.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Solyc03g115450 No alias LOW QUALITY:Zinc finger protein 1 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc11g073060 No alias Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!