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  5. Brara.E03061.1

Brara.E03061.1


Description : platform ATPase CDC48


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03061.1
Cluster HCAA Clusters: Cluster_388

Target Alias Description ECC score Gene Family Method Actions
Bradi1g74916 No alias ATPase, AAA-type, CDC48 protein 0.02 Orthogroups_2024-Update
Brara.I03613.1 No alias platform ATPase CDC48 0.04 Orthogroups_2024-Update
Glyma.06G180000 No alias ATPase, AAA-type, CDC48 protein 0.03 Orthogroups_2024-Update
Mp2g12350.1 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Seita.9G239600.1 No alias platform ATPase CDC48 0.03 Orthogroups_2024-Update
Solyc03g112590 No alias cell division cycle 48 (AHRD V3.3 *** AT3G09840.1) 0.03 Orthogroups_2024-Update
Solyc10g084050 No alias cell division cycle 48 (AHRD V3.3 *** AT3G09840.1) 0.03 Orthogroups_2024-Update
Sopen06g031380 No alias ATPase family associated with various cellular activities (AAA) 0.03 Orthogroups_2024-Update
Sopen10g033500 No alias ATPase family associated with various cellular activities (AAA) 0.03 Orthogroups_2024-Update
Sopen11g028560 No alias ATPase family associated with various cellular activities (AAA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004201 Cdc48_dom2 131 194
IPR003338 CDC4_N-term_subdom 29 110
IPR003959 ATPase_AAA_core 244 373
IPR003959 ATPase_AAA_core 517 651
No external refs found!