1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.E03115.1

Brara.E03115.1


Description : EC_2.4 glycosyltransferase


Gene families : OG_42_0001164 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001164_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03115.1
Cluster HCAA Clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Brara.E00704.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
GRMZM2G399048 No alias alpha 1,4-glycosyltransferase family protein 0.04 Orthogroups_2024-Update
Sopen10g028410 No alias Alpha 1,4-glycosyltransferase conserved region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0090729 toxin activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007577 GlycoTrfase_DXD_sugar-bd_CS 140 261
IPR007652 A1-4-GlycosylTfrase_dom 279 402
No external refs found!