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  5. Brara.E03155.1

Brara.E03155.1


Description : MYB class-R2R3 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03155.1
Cluster HCAA Clusters: Cluster_369

Target Alias Description ECC score Gene Family Method Actions
84369 No alias myb domain protein 97 0.03 Orthogroups_2024-Update
A4A49_03021 No alias transcription factor myb48 0.02 Orthogroups_2024-Update
AC206901.3_FG005 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
At1g74080 No alias Transcription factor MYB122... 0.02 Orthogroups_2024-Update
At5g55020 No alias Transcription factor MYB120... 0.04 Orthogroups_2024-Update
Bradi2g01960 No alias myb domain protein 62 0.04 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.02 Orthogroups_2024-Update
Bradi5g21970 No alias myb domain protein 50 0.04 Orthogroups_2024-Update
Brara.F02806.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Brara.G00519.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Brara.I01367.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G038722 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
GRMZM2G159547 No alias myb domain protein 93 0.04 Orthogroups_2024-Update
Glyma.03G250600 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Glyma.05G040700 No alias myb domain protein 86 0.02 Orthogroups_2024-Update
Glyma.10G142200 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
Glyma.12G057900 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.13G141900 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.15G144000 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.19G184500 No alias myb domain protein 36 0.04 Orthogroups_2024-Update
HORVU2Hr1G081720.2 No alias transcriptional regulator *(MS188) & transcriptional... 0.04 Orthogroups_2024-Update
HORVU2Hr1G106400.3 No alias MYB class-R2R3 subgroup-3 transcription factor & MYB... 0.03 Orthogroups_2024-Update
HORVU3Hr1G116740.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G060600.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g50720 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g38210 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g40330 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10048467g0010 No alias (at5g35550 : 171.0) TT2 encodes a R2R3 MYB domain... 0.03 Orthogroups_2024-Update
PSME_00032477-RA No alias (at1g66230 : 167.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00039845-RA No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00041780-RA No alias (at4g38620 : 265.0) Encodes a R2R3 MYB protein which is... 0.05 Orthogroups_2024-Update
PSME_00052777-RA No alias (at4g38620 : 269.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
Potri.001G099800 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Potri.003G132000 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Potri.006G066400 No alias myb domain protein 82 0.03 Orthogroups_2024-Update
Potri.006G170800 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Potri.009G134000 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Potri.014G081200 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Pp1s133_87V6 No alias myb transcription factor 0.03 Orthogroups_2024-Update
Pp1s277_14V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.02 Orthogroups_2024-Update
Seita.1G239400.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Seita.2G204300.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G283200.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.6G239700.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G209300.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G087600.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Solyc02g082040 No alias R2R3MYB transcription factor 56 0.03 Orthogroups_2024-Update
evm.model.contig_444.1 No alias (at5g02320 : 125.0) Encodes a putative c-MYB-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 32 79
IPR001005 SANT/Myb 85 129
No external refs found!