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  5. Brara.E03199.1

Brara.E03199.1


Description : autophagosome E2 ATG12-ubiquitin-conjugating enzyme *(ATG10)


Gene families : OG_42_0007645 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007645_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03199.1
Cluster HCAA Clusters: Cluster_243


Type GO Term Name Evidence Source
MF GO:0019787 ubiquitin-like protein transferase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
MF GO:0043138 3'-5' DNA helicase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007135 Autophagy-rel_prot_3 30 226
No external refs found!