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  5. Brara.E03213.1

Brara.E03213.1


Description : E3 ubiquitin ligase


Gene families : OG_42_0002375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03213.1
Cluster HCAA Clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
A4A49_20543 No alias u-box domain-containing protein 9 0.04 Orthogroups_2024-Update
At3g07360 No alias RING-type E3 ubiquitin transferase... 0.04 Orthogroups_2024-Update
Seita.7G057600.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc09g056450 No alias U-box domain-containing protein 9 (AHRD V3.3 *** W9RDX3_9ROSA) 0.03 Orthogroups_2024-Update
Sopen09g020680 No alias U-box domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
BP GO:0016567 protein ubiquitination IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 75 142
IPR000225 Armadillo 293 329
No external refs found!