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  5. Brara.E03262.1

Brara.E03262.1


Description : E3 ubiquitin ligase component *(Doa10) of ER-associated protein degradation (ERAD) machinery


Gene families : OG_42_0003654 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003654_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03262.1
Cluster HCAA Clusters: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
A4A49_04776 No alias putative e3 ubiquitin ligase sud1 0.06 Orthogroups_2024-Update
HORVU7Hr1G083770.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 22 68
No external refs found!