1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At2g18050

At2g18050


Description : HIS1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VX64]


Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g18050
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Brara.I01061.1 No alias linker histone *(H1) 0.05 Orthogroups_2024-Update
Glyma.10G163300 No alias winged-helix DNA-binding transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.11G075500 No alias histone H1-3 0.03 Orthogroups_2024-Update
Glyma.20G225900 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
MA_102574g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_196776g0010 No alias (original description: no original description) 0.04 Orthogroups_2024-Update
MA_4008g0010 No alias (original description: no original description) 0.03 Orthogroups_2024-Update
MA_500183g0010 No alias (original description: no original description) 0.02 Orthogroups_2024-Update
MA_5243726g0010 No alias (p27806|h1_wheat : 91.3) Histone H1 - Triticum aestivum... 0.02 Orthogroups_2024-Update
MA_5951905g0010 No alias (p08283|h1_pea : 84.3) Histone H1 (PsH1b) (PsH1b-40) -... 0.02 Orthogroups_2024-Update
MA_6409g0010 No alias (original description: no original description) 0.03 Orthogroups_2024-Update
Pp1s518_9V6 No alias histone-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006334 nucleosome assembly IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0034508 centromere complex assembly IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 24 90
No external refs found!