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  5. Brara.E03289.1

Brara.E03289.1


Description : 3-dehydroquinate dehydratase and shikimate dehydrogenase


Gene families : OG_42_0002802 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002802_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03289.1
Cluster HCAA Clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Brara.A03658.1 No alias 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA 16Dec
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR001381 DHquinase_I 100 317
IPR013708 Shikimate_DH-bd_N 331 411
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 449 521
No external refs found!