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  5. Brara.E03319.1

Brara.E03319.1


Description : Unknown function


Gene families : OG_42_0001506 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03319.1
Cluster HCAA Clusters: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G147200 No alias RAN GTPase activating protein 1 0.02 Orthogroups_2024-Update
LOC_Os05g33870 No alias ran GTPase activating protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00007607-RA No alias (at5g19320 : 272.0) Encodes RAN GTPase activating... 0.02 Orthogroups_2024-Update
PSME_00054371-RA No alias (at5g19320 : 338.0) Encodes RAN GTPase activating... 0.03 Orthogroups_2024-Update
Potri.010G091100 No alias RAN GTPase activating protein 2 0.05 Orthogroups_2024-Update
Sobic.004G215700.1 No alias Ran-activating protein of nucleocytoplasmic transport 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 114 135
IPR001611 Leu-rich_rpt 143 162
No external refs found!