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  5. Brara.E03330.1

Brara.E03330.1


Description : pectin acetylesterase *(PAE)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03330.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G090500 No alias Pectinacetylesterase family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G098920.20 No alias pectin acetylesterase *(PAE) 0.05 Orthogroups_2024-Update
LOC_Os04g51340 No alias pectinacetylesterase domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_52077g0010 No alias (at4g19420 : 502.0) Pectinacetylesterase family protein;... 0.03 Orthogroups_2024-Update
Seita.5G411000.1 No alias pectin acetylesterase *(PAE) 0.02 Orthogroups_2024-Update
Solyc01g102350 No alias Pectinacetylesterase family protein (AHRD V3.3 *** AT3G05910.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0031082 BLOC complex IEP Predicted GO
CC GO:0031083 BLOC-1 complex IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044445 cytosolic part IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 48 394
No external refs found!