1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.E03383.1

Brara.E03383.1


Description : Unknown function


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03383.1
Cluster HCAA Clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
409960 No alias Heavy metal transport/detoxification superfamily protein 0.01 Orthogroups_2024-Update
A4A49_01156 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi2g01800 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g53750 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G119300 No alias Chloroplast-targeted copper chaperone protein 0.02 Orthogroups_2024-Update
Mp2g25910.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00053933-RA No alias (at3g56891 : 120.0) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
Potri.005G169700 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Seita.6G139900.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Predicted GO
CC GO:1902495 transmembrane transporter complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
CC GO:1990351 transporter complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 14 70
No external refs found!