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Description : R-loop reader protein *(ALBA1/2)
Gene families : OG_42_0000995 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000995_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.E03436.1 | |
| Cluster | HCAA Clusters: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.C03063.1 | No alias | R-loop reader protein *(ALBA1/2) | 0.03 | Orthogroups_2024-Update | |
| Brara.F02905.1 | No alias | R-loop reader protein *(ALBA1/2) | 0.05 | Orthogroups_2024-Update | |
| Potri.013G042900 | No alias | Alba DNA/RNA-binding protein | 0.03 | Orthogroups_2024-Update | |
| Seita.3G102400.1 | No alias | R-loop reader protein *(ALBA1/2) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Predicted GO |
| MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| BP | GO:0006811 | ion transport | IEP | Predicted GO |
| BP | GO:0006820 | anion transport | IEP | Predicted GO |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Predicted GO |
| BP | GO:0006950 | response to stress | IEP | Predicted GO |
| BP | GO:0006952 | defense response | IEP | Predicted GO |
| BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
| MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
| BP | GO:0015711 | organic anion transport | IEP | Predicted GO |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Predicted GO |
| BP | GO:0015743 | malate transport | IEP | Predicted GO |
| BP | GO:0015849 | organic acid transport | IEP | Predicted GO |
| MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Predicted GO |
| MF | GO:0020037 | heme binding | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| BP | GO:0046942 | carboxylic acid transport | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
| BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002775 | DNA/RNA-bd_Alba-like | 33 | 95 |
| No external refs found! |