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Description : GARP subgroup PHL transcription factor & transcription factor *(PHR1)
Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.E03448.1 | |
| Cluster | HCAA Clusters: Cluster_349 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 270428 | No alias | phosphate starvation response 1 | 0.03 | Orthogroups_2024-Update | |
| A4A49_12162 | No alias | protein phosphate starvation response 1 | 0.02 | Orthogroups_2024-Update | |
| A4A49_36129 | No alias | protein phosphate starvation response 1 | 0.05 | Orthogroups_2024-Update | |
| At2g42660 | No alias | At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0] | 0.04 | Orthogroups_2024-Update | |
| Bradi5g25320 | No alias | Homeodomain-like superfamily protein | 0.06 | Orthogroups_2024-Update | |
| Brara.A03315.1 | No alias | GARP subgroup PHL transcription factor | 0.03 | Orthogroups_2024-Update | |
| Brara.B01865.1 | No alias | GARP subgroup PHL transcription factor | 0.04 | Orthogroups_2024-Update | |
| Brara.G02892.1 | No alias | GARP subgroup PHL transcription factor | 0.03 | Orthogroups_2024-Update | |
| GRMZM5G846506 | No alias | myb-like HTH transcriptional regulator family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G070900 | No alias | Homeodomain-like superfamily protein | 0.07 | Orthogroups_2024-Update | |
| Glyma.07G153900 | No alias | myb-like HTH transcriptional regulator family protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.08G116700 | No alias | myb-like HTH transcriptional regulator family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.15G215000 | No alias | Homeodomain-like superfamily protein | 0.06 | Orthogroups_2024-Update | |
| Glyma.16G152200 | No alias | Homeodomain-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| HORVU7Hr1G107680.10 | No alias | transcription factor *(CLAUSA) | 0.03 | Orthogroups_2024-Update | |
| LOC_Os06g45410 | No alias | MYB family transcription factor, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| Mp4g07330.1 | No alias | G2-like GARP transcription factor | 0.02 | Orthogroups_2024-Update | |
| Mp4g08700.1 | No alias | G2-like GARP transcription factor | 0.04 | Orthogroups_2024-Update | |
| PSME_00007590-RA | No alias | (at2g38300 : 112.0) myb-like HTH transcriptional... | 0.03 | Orthogroups_2024-Update | |
| Potri.001G314800 | No alias | Homeodomain-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.010G185666 | No alias | Homeodomain-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G121600.1 | No alias | GARP subgroup PHL transcription factor & transcription... | 0.03 | Orthogroups_2024-Update | |
| Sopen03g002160 | No alias | Myb-like DNA-binding domain | 0.03 | Orthogroups_2024-Update | |
| Sopen04g003630 | No alias | Myb-like DNA-binding domain | 0.05 | Orthogroups_2024-Update | |
| Sopen05g034340 | No alias | MYB-CC type transfactor, LHEQLE motif | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | IEP | Predicted GO |
| CC | GO:0005618 | cell wall | IEP | Predicted GO |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Predicted GO |
| MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| CC | GO:0030312 | external encapsulating structure | IEP | Predicted GO |
| BP | GO:0044042 | glucan metabolic process | IEP | Predicted GO |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Predicted GO |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Predicted GO |
| CC | GO:0048046 | apoplast | IEP | Predicted GO |
| No external refs found! |