1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.E03531.1

Brara.E03531.1


Description : NAC-type transcription factor


Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03531.1
Cluster HCAA Clusters: Cluster_379

Target Alias Description ECC score Gene Family Method Actions
Bradi1g50057 No alias NAC (No Apical Meristem) domain transcriptional... 0.04 Orthogroups_2024-Update
Bradi3g13727 No alias NAC (No Apical Meristem) domain transcriptional... 0.04 Orthogroups_2024-Update
Brara.H02663.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.19G024500 No alias NAC domain containing protein 100 0.03 Orthogroups_2024-Update
HORVU5Hr1G074810.3 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
HORVU5Hr1G087840.5 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os07g48550 No alias no apical meristem protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.017G139500 No alias NAC domain containing protein 28 0.04 Orthogroups_2024-Update
Pp1s279_85V6 No alias no apical meristem 0.03 Orthogroups_2024-Update
Pp1s73_182V6 No alias nac domain ipr003441 0.03 Orthogroups_2024-Update
Sobic.004G112200.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G281900.3 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G071400.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G022400.1 No alias NAC-type transcription factor & transcriptional... 0.03 Orthogroups_2024-Update
Solyc05g055480 No alias NAC (AHRD V3.3 *** J7H8R1_CESNO) 0.05 Orthogroups_2024-Update
Sopen08g001990 No alias No apical meristem (NAM) protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR003441 NAC-dom 7 133
No external refs found!