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  5. Brara.E03564.1

Brara.E03564.1


Description : F-type thioredoxin *(Trx-F)


Gene families : OG_42_0005133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03564.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
At5g16400 No alias TRXF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDV9] 0.03 Orthogroups_2024-Update
Bradi2g58440 No alias thioredoxin F-type 1 0.03 Orthogroups_2024-Update
Cre05.g243050 No alias thioredoxin F-type 1 0.03 Orthogroups_2024-Update
Pp1s273_45V6 No alias thioredoxin f 0.03 Orthogroups_2024-Update
Sobic.009G043000.1 No alias F-type thioredoxin *(Trx-F) 0.03 Orthogroups_2024-Update
Solyc05g056300 No alias Thioredoxin (AHRD V3.3 *** A0A103YEZ4_CYNCS) 0.03 Orthogroups_2024-Update
Sopen05g034690 No alias Thioredoxin 0.03 Orthogroups_2024-Update
evm.model.contig_3835.2 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004529 exodeoxyribonuclease activity IEP Predicted GO
MF GO:0004536 deoxyribonuclease activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Predicted GO
MF GO:0008409 5'-3' exonuclease activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Predicted GO
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 71 171
No external refs found!