Brara.E03578.1

Description : S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase

Gene families : OG_42_0001259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001259_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E03578.1
Cluster	HCAA Clusters: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
At5g15950	No alias	S-adenosylmethionine decarboxylase proenzyme 2...	0.03	Orthogroups_2024-Update
Cre03.g205900	No alias	S-adenosylmethionine decarboxylase	0.01	Orthogroups_2024-Update
GRMZM2G154397	No alias	Adenosylmethionine decarboxylase family protein	0.02	Orthogroups_2024-Update
HORVU6Hr1G056110.3	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update
LOC_Os09g25625	No alias	S-adenosyl-l-methionine decarboxylase leader peptide,...	0.03	Orthogroups_2024-Update
Seita.7G154200.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEA	16Dec
BP	GO:0006576	cellular biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006596	polyamine biosynthetic process	None	Extended
BP	GO:0006597	spermine biosynthetic process	IEA	16Dec
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008215	spermine metabolic process	None	Extended
BP	GO:0008216	spermidine metabolic process	None	Extended
BP	GO:0008295	spermidine biosynthetic process	IEA	16Dec
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009309	amine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042401	cellular biogenic amine biosynthetic process	None	Extended
BP	GO:0044106	cellular amine metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097164	ammonium ion metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:2001070	starch binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001985	S-AdoMet_decarboxylase	7	330

External Links

No external refs found!

Brara.E03578.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation