Brara.E03620.1

Description : HD-ZIP I/II-type transcription factor

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E03620.1
Cluster	HCAA Clusters: Cluster_263

Target	Alias	Description	ECC score	Gene Family Method
At1g26960	No alias	Homeobox-leucine zipper protein ATHB-23...	0.03	Orthogroups_2024-Update
Bradi1g71930	No alias	homeobox 3	0.03	Orthogroups_2024-Update
Bradi3g38600	No alias	homeobox protein 5	0.06	Orthogroups_2024-Update
HORVU4Hr1G078410.2	No alias	HD-ZIP I/II-type transcription factor	0.06	Orthogroups_2024-Update
Potri.010G093400	No alias	Homeobox-leucine zipper protein family	0.03	Orthogroups_2024-Update
Seita.2G284000.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006813	potassium ion transport	IEP	Predicted GO
MF	GO:0015298	solute:cation antiporter activity	IEP	Predicted GO
MF	GO:0015299	solute:proton antiporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	128	168
IPR001356	Homeobox_dom	74	126

External Links

No external refs found!

Brara.E03620.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation