Brara.E03658.1

Description : HD-ZIP I/II-type transcription factor

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E03658.1
Cluster	HCAA Clusters: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
18217	No alias	homeobox protein 16	0.02	Orthogroups_2024-Update
19476	No alias	homeobox 1	0.02	Orthogroups_2024-Update
A4A49_36238	No alias	homeobox-leucine zipper protein hat5	0.03	Orthogroups_2024-Update
At5g66700	No alias	Homeobox-leucine zipper protein ATHB-53...	0.04	Orthogroups_2024-Update
Bradi3g35850	No alias	homeobox 1	0.04	Orthogroups_2024-Update
Bradi4g29380	No alias	homeobox 1	0.02	Orthogroups_2024-Update
Bradi4g32737	No alias	homeobox protein 16	0.02	Orthogroups_2024-Update
Brara.D01330.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D02811.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00890.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Brara.I03165.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I04272.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Brara.I04578.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.04G231400	No alias	homeobox 7	0.03	Orthogroups_2024-Update
Glyma.19G021100	No alias	homeobox 3	0.02	Orthogroups_2024-Update
HORVU2Hr1G092710.2	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
HORVU4Hr1G075180.3	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G072810.6	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g10210	No alias	homeobox domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_12053g0010	No alias	(at1g69780 : 145.0) Encodes a homeodomain leucine zipper...	0.05	Orthogroups_2024-Update
MA_19453g0040	No alias	(at3g01470 : 183.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
MA_3951g0010	No alias	(at1g69780 : 143.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
Mp3g02320.1	No alias	transcription factor (HD-ZIP I/II)	0.01	Orthogroups_2024-Update
PSME_00014389-RA	No alias	(at1g69780 : 146.0) Encodes a homeodomain leucine zipper...	0.04	Orthogroups_2024-Update
PSME_00014391-RA	No alias	(at1g69780 : 134.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
PSME_00017541-RA	No alias	(at2g22430 : 139.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
PSME_00032088-RA	No alias	(at1g69780 : 147.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
Potri.005G071900	No alias	homeobox protein 6	0.03	Orthogroups_2024-Update
Potri.012G023700	No alias	homeobox 7	0.04	Orthogroups_2024-Update
Pp1s57_194V6	No alias	No description available	0.03	Orthogroups_2024-Update
Seita.2G193200.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Seita.6G145000.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G272900.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Solyc01g096320	No alias	Homeobox-leucine zipper protein (AHRD V3.3 *** M4W1Z7_TOBAC)	0.03	Orthogroups_2024-Update
Solyc02g086930	No alias	Homeobox associated leucine zipper protein (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc04g005800	No alias	Homeobox leucine zipper family protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen01g040080	No alias	Homeobox domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Predicted GO
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0004512	inositol-3-phosphate synthase activity	IEP	Predicted GO
MF	GO:0004602	glutathione peroxidase activity	IEP	Predicted GO
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	Predicted GO
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
BP	GO:0006020	inositol metabolic process	IEP	Predicted GO
BP	GO:0006021	inositol biosynthetic process	IEP	Predicted GO
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Predicted GO
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Predicted GO
BP	GO:0006534	cysteine metabolic process	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
BP	GO:0009069	serine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009092	homoserine metabolic process	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016872	intramolecular lyase activity	IEP	Predicted GO
BP	GO:0019346	transsulfuration	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0046165	alcohol biosynthetic process	IEP	Predicted GO
BP	GO:0046173	polyol biosynthetic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0050667	homocysteine metabolic process	IEP	Predicted GO
MF	GO:0070566	adenylyltransferase activity	IEP	Predicted GO
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	121	163
IPR001356	Homeobox_dom	66	119

External Links

No external refs found!

Brara.E03658.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation