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  5. Brara.F00020.1

Brara.F00020.1


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex


Gene families : OG_42_0000776 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000776_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00020.1
Cluster HCAA Clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre09.g391875 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G017700 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Kfl00164_0060 kfl00164_0060_v1.1 (at1g78070 : 478.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
MA_28828g0010 No alias (at3g13340 : 574.0) Transducin/WD40 repeat-like... 0.04 Orthogroups_2024-Update
Seita.2G396300.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Sopen07g034310 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 371 408
No external refs found!