Brara.F00039.1

Description : RNA splicing factor *(SCL28/30/33)

Gene families : OG_42_0000852 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000852_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.F00039.1
Cluster	HCAA Clusters: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
A4A49_31385	No alias	serinearginine-rich sc35-like splicing factor scl30a	0.03	Orthogroups_2024-Update
LOC_Os03g25770	No alias	RNA recognition motif containing protein, putative, expressed	0.03	Orthogroups_2024-Update
Potri.001G006400	No alias	SC35-like splicing factor 30A	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004366	glycerol-3-phosphate O-acyltransferase activity	IEP	Predicted GO
CC	GO:0005643	nuclear pore	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
MF	GO:0016298	lipase activity	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0017056	structural constituent of nuclear pore	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
BP	GO:0019915	lipid storage	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051235	maintenance of location	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	41	110

External Links

No external refs found!