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  5. Solyc03g059010

Solyc03g059010


Description : Carbon catabolite repressor 4-like protein (AHRD V3.3 *** A0A0B0P8G6_GOSAR)


Gene families : OG_42_0002806 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002806_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g059010
Cluster HCCA clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Brara.G01806.1 No alias deadenylase component *(CCR4) of mRNA deadenylation... 0.04 Orthogroups_2024-Update
Glyma.19G204800 No alias DNAse I-like superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0005351 carbohydrate:proton symporter activity IEP Predicted GO
MF GO:0005402 carbohydrate:cation symporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006023 aminoglycan biosynthetic process IEP Predicted GO
BP GO:0006024 glycosaminoglycan biosynthetic process IEP Predicted GO
BP GO:0006029 proteoglycan metabolic process IEP Predicted GO
BP GO:0008643 carbohydrate transport IEP Predicted GO
BP GO:0009100 glycoprotein metabolic process IEP Predicted GO
BP GO:0009101 glycoprotein biosynthetic process IEP Predicted GO
BP GO:0015012 heparan sulfate proteoglycan biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Predicted GO
MF GO:0015293 symporter activity IEP Predicted GO
MF GO:0015294 solute:cation symporter activity IEP Predicted GO
MF GO:0015295 solute:proton symporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0030166 proteoglycan biosynthetic process IEP Predicted GO
BP GO:0030201 heparan sulfate proteoglycan metabolic process IEP Predicted GO
BP GO:0030203 glycosaminoglycan metabolic process IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR031615 Zfn-C6H2 71 110
IPR005135 Endo/exonuclease/phosphatase 245 577
No external refs found!