1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.F00154.1

Brara.F00154.1


Description : Unknown function


Gene families : OG_42_0000532 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00154.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
227818 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
A4A49_13414 No alias stem-specific protein tsjt1 0.02 Orthogroups_2024-Update
A4A49_41896 No alias stem-specific protein tsjt1 0.03 Orthogroups_2024-Update
At3g15450 No alias AT3g15450/MJK13_11 [Source:UniProtKB/TrEMBL;Acc:Q9LE80] 0.06 Orthogroups_2024-Update
At4g27450 No alias AT4g27450/F27G19_50 [Source:UniProtKB/TrEMBL;Acc:Q93V62] 0.04 Orthogroups_2024-Update
Bradi5g26320 No alias Aluminium induced protein with YGL and LRDR motifs 0.02 Orthogroups_2024-Update
Brara.A01715.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H01516.1 No alias Unknown function 0.07 Orthogroups_2024-Update
GRMZM2G133023 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
Glyma.12G150500 No alias Aluminium induced protein with YGL and LRDR motifs 0.05 Orthogroups_2024-Update
Glyma.12G222400 No alias Aluminium induced protein with YGL and LRDR motifs 0.05 Orthogroups_2024-Update
Glyma.13G207800 No alias Aluminium induced protein with YGL and LRDR motifs 0.02 Orthogroups_2024-Update
Glyma.13G279200 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
Glyma.15G071300 No alias Aluminium induced protein with YGL and LRDR motifs 0.04 Orthogroups_2024-Update
Glyma.15G072400 No alias Aluminium induced protein with YGL and LRDR motifs 0.04 Orthogroups_2024-Update
HORVU5Hr1G094370.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os12g05050 No alias stem-specific protein TSJT1, putative, expressed 0.03 Orthogroups_2024-Update
MA_10429415g0010 No alias (at5g19140 : 80.1) AILP1; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Mp7g03680.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 Orthogroups_2024-Update
PSME_00000821-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00023908-RA No alias (at5g19140 : 268.0) AILP1; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
PSME_00035383-RA No alias (at5g43830 : 273.0) Aluminium induced protein with YGL... 0.06 Orthogroups_2024-Update
Pp1s257_73V6 No alias F5N5.2; expressed protein [Arabidopsis thaliana] 0.07 Orthogroups_2024-Update
Seita.3G014100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G269200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g006490 No alias glutaminase domain-containing protein 0.03 Orthogroups_2024-Update
Sopen01g031640 No alias Aluminium induced protein 0.03 Orthogroups_2024-Update
Sopen12g007050 No alias Aluminium induced protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004371 glycerone kinase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006071 glycerol metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006382 adenosine to inosine editing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016553 base conversion or substitution editing IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0019400 alditol metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR024286 DUF3700 2 229
No external refs found!