Brara.F00179.1

Description : Unknown function

Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.F00179.1
Cluster	HCAA Clusters: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
Brara.A01601.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.F00864.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.K00645.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
GRMZM2G032602	No alias	NB-ARC domain-containing disease resistance protein	0.04	Orthogroups_2024-Update
HORVU3Hr1G108500.3	No alias	Unknown function	0.03	Orthogroups_2024-Update
MA_10062820g0010	No alias	(at1g12280 : 143.0) LRR and NB-ARC domains-containing...	0.02	Orthogroups_2024-Update
PSME_00021066-RA	No alias	(at1g12220 : 163.0) Resistance gene, mediates resistance...	0.02	Orthogroups_2024-Update
PSME_00026738-RA	No alias	(at1g61180 : 216.0) LRR and NB-ARC domains-containing...	0.02	Orthogroups_2024-Update
PSME_00043408-RA	No alias	(at1g63350 : 110.0) Disease resistance protein...	0.03	Orthogroups_2024-Update
PSME_00045900-RA	No alias	(at1g12220 : 213.0) Resistance gene, mediates resistance...	0.03	Orthogroups_2024-Update
Potri.001G405025	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.018G137900	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T026800	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T028301	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Seita.2G176400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G146500.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sopen08g004810	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	16Dec
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004527	exonuclease activity	IEP	Predicted GO
MF	GO:0004529	exodeoxyribonuclease activity	IEP	Predicted GO
MF	GO:0004536	deoxyribonuclease activity	IEP	Predicted GO
MF	GO:0008297	single-stranded DNA exodeoxyribonuclease activity	IEP	Predicted GO
MF	GO:0008409	5'-3' exonuclease activity	IEP	Predicted GO
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016895	exodeoxyribonuclease activity, producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0035312	5'-3' exodeoxyribonuclease activity	IEP	Predicted GO
MF	GO:0045145	single-stranded DNA 5'-3' exodeoxyribonuclease activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	145	359

External Links

No external refs found!

Brara.F00179.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation