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  5. Brara.F00182.1

Brara.F00182.1


Description : mitochondrial transcript stability factor *(MTSF2)


Gene families : OG_42_0006884 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006884_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00182.1
Cluster HCAA Clusters: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Bradi4g43547 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 Orthogroups_2024-Update
Glyma.07G102000 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 160 206
IPR002885 Pentatricopeptide_repeat 332 381
IPR002885 Pentatricopeptide_repeat 612 662
IPR002885 Pentatricopeptide_repeat 700 745
IPR002885 Pentatricopeptide_repeat 437 485
IPR002885 Pentatricopeptide_repeat 508 556
IPR002885 Pentatricopeptide_repeat 227 276
IPR002885 Pentatricopeptide_repeat 575 606
IPR002885 Pentatricopeptide_repeat 398 430
No external refs found!