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  5. Brara.F00213.1

Brara.F00213.1


Description : Unknown function


Gene families : OG_42_0000123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00213.1
Cluster HCAA Clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
A4A49_41150 No alias agglutinin 0.03 Orthogroups_2024-Update
At1g52060 No alias Jacalin-related lectin 9 [Source:UniProtKB/Swiss-Prot;Acc:F4IB95] 0.04 Orthogroups_2024-Update
Bradi4g26112 No alias Mannose-binding lectin superfamily protein 0.04 Orthogroups_2024-Update
Brara.H00186.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00188.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G142891 No alias Mannose-binding lectin superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G194450 No alias Mannose-binding lectin superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os01g25280 No alias jacalin-like lectin domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00030331-RA No alias (at1g19715 : 88.2) Mannose-binding lectin superfamily... 0.03 Orthogroups_2024-Update
PSME_00046944-RA No alias (at1g19715 : 147.0) Mannose-binding lectin superfamily... 0.02 Orthogroups_2024-Update
Potri.002G030400 No alias Mannose-binding lectin superfamily protein 0.03 Orthogroups_2024-Update
Seita.8G040500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G344800.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 14 141
No external refs found!