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  5. Brara.F00236.1

Brara.F00236.1


Description : regulatory component B of PP2A phosphatase complexes


Gene families : OG_42_0001557 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001557_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.F00236.1
Cluster HCAA Clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g41630 No alias serine/threonine protein phosphatase 2A 55 kDa... 0.03 Orthogroups_2024-Update
Potri.001G197300 No alias Protein phosphatase 2A, regulatory subunit PR55 0.02 Orthogroups_2024-Update
evm.model.tig00000553.26 No alias (at1g17720 : 219.0) type 2A protein serine/threonine... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0072546 ER membrane protein complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 199 236
No external refs found!