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  5. Brara.F00316.1

Brara.F00316.1


Description : X-type thioredoxin *(Trx-X)


Gene families : OG_42_0000653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00316.1
Cluster HCAA Clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
Bradi4g40800 No alias thioredoxin M-type 4 0.03 Orthogroups_2024-Update
Glyma.10G285000 No alias thioredoxin X 0.03 Orthogroups_2024-Update
HORVU5Hr1G033050.1 No alias thioredoxin *(TRX-M) 0.03 Orthogroups_2024-Update
HORVU5Hr1G033060.1 No alias thioredoxin *(TRX-M) 0.03 Orthogroups_2024-Update
Kfl00237_0110 kfl00237_0110_v1.1 (p23400|trxm_chlre : 159.0) Thioredoxin M-type,... 0.02 Orthogroups_2024-Update
Pp1s106_67V6 No alias thioredoxin m - 0.01 Orthogroups_2024-Update
Seita.3G016700.1 No alias X-type thioredoxin *(Trx-X) 0.03 Orthogroups_2024-Update
Sopen01g050220 No alias Thioredoxin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP Predicted GO
MF GO:0061657 UFM1 conjugating enzyme activity IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 73 173
No external refs found!