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At2g18780


Description : F-box protein At2g18780 [Source:UniProtKB/Swiss-Prot;Acc:Q84V15]


Gene families : OG_42_0000379 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g18780
Cluster HCCA clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
At3g04250 No alias F-box associated ubiquitination effector family protein... 0.04 Orthogroups_2024-Update
At3g19890 No alias F-box protein At3g19890 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSN8] 0.03 Orthogroups_2024-Update
At3g20700 No alias F-box associated ubiquitination effector family protein... 0.03 Orthogroups_2024-Update
At3g22700 No alias F-box protein At3g22700 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUJ1] 0.03 Orthogroups_2024-Update
Brara.A00991.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.A03231.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C03996.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D00250.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 208 367
IPR001810 F-box_dom 9 53
No external refs found!