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  5. Brara.F00372.1

Brara.F00372.1


Description : Unknown function


Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00372.1
Cluster HCAA Clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Brara.I02412.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os04g42810 No alias transposon protein, putative, unclassified 0.02 Orthogroups_2024-Update
Sopen05g021350 No alias hAT family C-terminal dimerisation region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 555 637
IPR025525 hAT-like_transposase_RNase-H 424 521
No external refs found!