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  5. Brara.F00402.1

Brara.F00402.1


Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes


Gene families : OG_42_0000356 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00402.1
Cluster HCAA Clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
At2g03190 No alias SKP1-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:O81055] 0.03 Orthogroups_2024-Update
At3g25650 No alias SKP1-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEL7] 0.03 Orthogroups_2024-Update
At3g60020 No alias SK5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPE2] 0.03 Orthogroups_2024-Update
Brara.B02781.1 No alias ASK-type linker component of SCF E3 ubiquitin ligase complexes 0.03 Orthogroups_2024-Update
LOC_Os07g05180 No alias Skp1 family, dimerisation domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.4G186900.1 No alias ASK-type linker component of SCF E3 ubiquitin ligase complexes 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 119 166
IPR016073 Skp1_comp_POZ 25 76
No external refs found!